Baroux C., Tatout C. (eds.) Methods for Plant Nucleus and Chromatin Studies: Methods and Protocols

Humana Press, 2025. — 347 p.Preface
Contributors
Molecular Profiling of Chromatin and Genome Composition
Whole-Genome Bisulfite Sequencing with a Small Amount of DNA
Quantitative Profiling of Histone Variants and Posttranslational Modifications by Tandem Mass Spectrometry in Arabi...
HiChIP for Plant Tissues
A Practical Approach to High-Throughput and Accurate Mapping-by-Sequencing in Arabidopsis
ChIP-Rx: Arabidopsis Chromatin Profiling Using Quantitative ChIP-Seq
Chromatin Immunoprecipitation for Standard, Rare, or Weakly Binding Proteins
Identification of Chromatin and Nuclear Associated Complexes
Isolation and Identification of Nuclear Protein Complexes Using GFP-Tagged Arabidopsis Lines and IP-MS Approach
Identification of Plant Chromatin Interaction Networks Using IP-MS and co-IP
Unraveling Plant Nuclear Envelope Composition Using Proximity Labeling Proteomics
A Method for Characterizing Protein-Histone Peptide Interactions In Vitro
Vizualisation of Chromatin Organisation and Functional Domains
Detection and Automated Quantification of Nucleocytoplasmic RNA Fractions in Arabidopsis Using smFISH
Simultaneous Visualization of Protein and Genomic Regions in Plant Nuclei
Microfluidics to Follow Spatiotemporal Dynamics at the Nucleo-Cytoplasmic Interface During Plant Root Growth
Characterizations of Nuclear Organization and Chromatin Modifications in Mature Embryos from Arabidopsis Dry Seeds
3D STED Imaging of Isolated Arabidopsis thaliana Nuclei
Computational Modeling
Understanding and Simulating the Dynamics of a Polymer-Like Chromatin
Technical Advance
dCas-Based Tools to Visualize Chromatin or Modify Epigenetic Marks at Specific Plant Genomic Loci
Using Callus as an Ex Vivo System for Chromatin Analysis
Index